BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013B03SP1|AL426467
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1767 1631 0.0
>3x_Contig1767
Length = 23302
Score = 1631 bits (820), Expect = 0.0
Identities = 834/843 (98%)
Strand = Plus / Minus
Query: 1 atcaatakggatcggatcttgtgcaatcgaaactctatcatcgctgtcattgctgttatt 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20200 atcaatagggatcggatcttgtgcaatcgaaactctatcatcgctgtcattgctgttatt 20141
Query: 61 ttggaaatgcattggtctatacttcatatcatcatacatacgaacaccagtcacatcgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20140 ttggaaatgcattggtctatacttcatatcatcatacatacgaacaccagtcacatcgtg 20081
Query: 121 aaaattcgctttctctgtttctgagtaaaccctagtcaaacgactattactattattagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20080 aaaattcgctttctctgtttctgagtaaaccctagtcaaacgactattactattattagt 20021
Query: 181 actgttatcgttgtcgttgttactgagatttgtattggttagcgtagaattcgtatcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20020 actgttatcgttgtcgttgttactgagatttgtattggttagcgtagaattcgtatcacc 19961
Query: 241 tttacgcatccttcttggcttaaaggaaagctgctcttcataatcactggattcttgata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19960 tttacgcatccttcttggcttaaaggaaagctgctcttcataatcactggattcttgata 19901
Query: 301 agattcactagttctagaagagccgatgttaaaatttaccgcatgattatmagagtcatt 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 19900 agattcactagttctagaagagccgatgttaaaatttaccgcatgattataagagtcatt 19841
Query: 361 cttatgtcgtagtttgaaagagtctctttcattatcctctctttgagtcaaagactgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19840 cttatgtcgtagtttgaaagagtctctttcattatcctctctttgagtcaaagactgtaa 19781
Query: 421 tgatccaaccgaaaccacctcactagggaaatctcgttcatacaacgttggggtattaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19780 tgatccaaccgaaaccacctcactagggaaatctcgttcatacaacgttggggtattaga 19721
Query: 481 ccgtttcattcctgagccaacattatagctcgaagacatctcctggtgaaaacaaaatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19720 ccgtttcattcctgagccaacattatagctcgaagacatctcctggtgaaaacaaaatga 19661
Query: 541 gtgcgagtgtggatcgagtcacactagagtatcgattctttccttgaagaaccaggaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19660 gtgcgagtgtggatcgagtcacactagagtatcgattctttccttgaagaaccaggaaaa 19601
Query: 601 aaagaatagaaagaaaagaagacgataagtttcttatcttcaatatctcgcttgtctcgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19600 aaagaatagaaagaaaagaagacgataagtttcttatcttcaatatctcgcttgtctcgt 19541
Query: 661 aacaataaaatcgttgagtaccagtcgatagcgatgtttcctgnntacccnttaaacagn 720
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 19540 aacaataaaatcgttgagtaccagtcgatagcgatgtttcctgtttaccctttaaacagt 19481
Query: 721 gngaatcgactaatgttttgatattggawactcgttaaaatcygttttattggattaaat 780
| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 19480 gagaatcgactaatgttttgatattggaaactcgttaaaatccgttttattggattaaat 19421
Query: 781 accctttacggggggaaagtaataacgtcacgtgactttcattagtggagaaacttatcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19420 accctttacggggggaaagtaataacgtcacgtgactttcattagtggagaaacttatcc 19361
Query: 841 atc 843
|||
Sbjct: 19360 atc 19358
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6178
Number of Sequences: 1807
Number of extensions: 6178
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)